Microbial sequencing methods for monitoring of anaerobic treatment of antibiotics to optimize performance and prevent system failure

Aydin S.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, cilt.100, sa.12, ss.5313-5321, 2016 (SCI-Expanded) identifier identifier identifier

  • Yayın Türü: Makale / Derleme
  • Cilt numarası: 100 Sayı: 12
  • Basım Tarihi: 2016
  • Doi Numarası: 10.1007/s00253-016-7533-5
  • Dergi Adı: APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus
  • Sayfa Sayıları: ss.5313-5321
  • Anahtar Kelimeler: Anaerobic treatment process, Anaerobic microbial community, Microbial sequencing techniques, Antibiotics, REAL-TIME PCR, PHARMACEUTICAL WASTE-WATER, RESISTANCE GENES, COMMUNITY STRUCTURE, TREATMENT-PLANT, DIVERSITY, DIGESTION, BACTERIA, QUANTIFICATION, REACTORS
  • İstanbul Üniversitesi Adresli: Hayır

Özet

As a result of developments in molecular technologies and the use of sequencing technologies, the analyses of the anaerobic microbial community in biological treatment process has become increasingly prevalent. This review examines the ways in which microbial sequencing methods can be applied to achieve an extensive understanding of the phylogenetic and functional characteristics of microbial assemblages in anaerobic reactor if the substrate is contaminated by antibiotics which is one of the most important toxic compounds. It will discuss some of the advantages and disadvantages associated with microbial sequencing techniques that are more commonly employed and will assess how a combination of the existing methods may be applied to develop a more comprehensive understanding of microbial communities and improve the validity and depth of the results for the enhancement of the stability of anaerobic reactors.