Education Information
2010 - 2016
2010 - 2016Doctorate
Istanbul University, Institute of Graduate Studies In Sciences, Moleküler Biyoloji Ve Genetik, Turkey
2007 - 2010
2007 - 2010Postgraduate
Istanbul University, Fen Bilimleri Ensititüsü, Moleküler Biyoloji Ve Genetik, Turkey
Dissertations
2016
2016Doctorate
TUZ STRESİ ETKİSİNDEKİ ARPA BİTKİLERİNİN GEN ANLATIM PROFİLLERİ
Istanbul University, Institute of Graduate Studies In Sciences, Moleküler Biyoloji Ve Genetik
2010
2010Postgraduate
Agrobacterium tumefaciens ARACILIĞIYLA GEN AKTARILMIŞ ARPADA (Hordeum vulgare L) TRANSGEN ENTEGRASYONUNUN ANALİZİ
Istanbul University, Institute of Graduate Studies In Sciences, Moleküler Biyoloji Ve Genetik
Foreign Languages
C2 Mastery
C2 MasteryEnglish
Certificates, Courses and Trainings
2021
2021Eğitimde Ölçme-Değerlendirme İlkelerine Uygun Sınav Hazırlama Yöntemleri
Vocational Training
İStanbul Üniversitesi Sürekli Eğitim Uygulama ve Araştırma Merkezi
2021
2021İş Sağlığı ve Güvenliği Eğitimleri
Occupational Health and Safety
İstanbul Üniversitesi
2020
2020Planlamadan Değerlendirmeye Uzaktan Eğitim: Öğrenme ve Öğretme Süreci
Education Management and Planning
İstanbul Üniversitesi
2020
20203rd International Eurasian Conference on Biological and Chemical Sciences
Other
Eurasian Biochem 2020
2019
20193rd International Congress of Plant Science and Technology
Other
Trakya University, Qatar University, Anatolia Science Academy
2019
2019Hasat Uluslararası Tarım ve Orman Kongresi
Other
Adnan Menderes Ünivesitesi, T.C. Tarım ve Orman Bakanlığı
2018
2018İş Sağlığı ve Güvenliği Eğitimleri
Occupational Health and Safety
İstanbul Üniversitesi
2017
2017İş Sağlığı ve Güvenliği
Occupational Health and Safety
İstanbul Üniversitesi-SEM
2017
2017ASM Virtual Workshop on Culture of Responsibility
Other
The American Society for Microbiology
2016
2016Tübitak 1000 Projeleri AR-GE Strateji Çalıştayı
Innovative Product Design
İstanbul Üniversitesi
2014
2014Genom Varyasyonları: Uygulama ve Veri Analizleri Sempozyumu
Health&Medicine
İstanbul Üniversitesi BİYOGEM
2013
2013İlaç Sentezi ve Sektörde İlaç
Health&Medicine
Türkiye Kimya Derneği
2012
2012GDO Tanısı 2012 Sempozyumu
Other
İstanbul Üniversitesi-BİYOGEM
2011
2011European Biotechnology Congress
Health&Medicine
uropean Biotechnology Thematic Network Association (EBTNA) and Turkish Society of Medical Genetics
2011
2011New Trends in Clinical Proteomics Symposium
Health&Medicine
Proteomics Society Turkey
2010
2010Light Cycler 480 cihazı-software 1.5 Eğitimi
Other
Elips Sağlık Ürünleri LTD. ŞTİç
2009
2009III. International Congress of Molecular Medicine
Health&Medicine
Turkish Society of Molecular Medicine
Research Areas
Life Sciences
Molecular Biology and Genetics
Plant Molecular Genetics
Genetic Engineering
Natural Sciences
Academic Titles / Tasks
2022 - Continues
2022 - ContinuesAssistant Professor
Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü
2022 - Continues
2022 - ContinuesAssociate Professor
Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü
2016 - 2022
2016 - 2022Research Assistant PhD
Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü
2009 - 2016
2009 - 2016Research Assistant
Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü
Managerial Experience
2024 - Continues
2024 - ContinuesDeputy Head of Department
Istanbul University, Faculty Of Science, Moleküler Biyoloji Ve Genetik Bölümü
Non Academic Experience
2012 - 2012
2012 - 2012Other, Rothamsted Research Center
2006 - 2007
2006 - 2007Business Establishment Private, Mikrogen İlaç San. Ve Tic. Aş
2006 - 2007
2006 - 2007Ürün müdür yardımcığı
Mikrogen İlaç Sanayi
Published journal articles indexed by SCI, SSCI, and AHCI
2023
2023Transcriptomic analysis of salt stress induced chlorophyll biosynthesis-related genes in photoheterotrophic Arabidopsis thaliana calli
Çelik H., Arıkan B., Kara N., Uçarlı C., Çakır Ö.
FUNCTIONAL & INTEGRATIVE GENOMICS
, vol.23, no.2, 2023 (SCI-Expanded)
2021
2021Genome-wide identification and in silico gene expression analysis of the related to ABI3/VP1 (RAV) transcription factor family in barley
UÇARLI C.
BIOCELL
, vol.45, no.6, pp.1673-1685, 2021 (SCI-Expanded)
2019
2019Differential physiological and molecular responses of three-leaf stage barley (Hordeum vulgare L.) under salt stress within hours
Ucarli C., Gurel F.
PLANT BIOTECHNOLOGY REPORTS
, 2019 (SCI-Expanded)
2019
2019Genetic, Morphological, and Biochemical Diversity of Argan Tree (<i>Argania spinosa</i> L.) (Sapotaceae) in Tunisia.
Louatı M., Ucarli C., Arikan B., Ghada B., Hannachı A. S., Turgut-Kara N.
Plants (Basel, Switzerland)
, vol.8, 2019 (SCI-Expanded)
2019
2019Nutritional and health benefits of legumes and their distinctive genomic properties
Cakir O., Ucarli C., Tarhan C., Pekmez M., Turgut-Kara N.
FOOD SCIENCE AND TECHNOLOGY
, vol.39, no.1, pp.1-12, 2019 (SCI-Expanded)
2017
2017Analysis of early events in barley (Hordeum vulgare L.) roots in response to Fusarium culmorum infection
Tufan F., Ucarli C., Tunali B., Gurel F.
EUROPEAN JOURNAL OF PLANT PATHOLOGY
, vol.148, pp.343-355, 2017 (SCI-Expanded)
2016
2016Comparison of expression patterns of selected drought-responsive genes in barley (Hordeum vulgare L.) under shock-dehydration and slow drought treatments
Gurel F., OZTURK N. Z., Yoruk E., Ucarli C., Poyraz N.
PLANT GROWTH REGULATION
, vol.80, no.2, pp.183-193, 2016 (SCI-Expanded)
2016
2016Barley Genes as Tools to Confer Abiotic Stress Tolerance in Crops
Gurel F., Ozturk Z. N., Ucarli C., Rosellını D.
FRONTIERS IN PLANT SCIENCE
, vol.7, 2016 (SCI-Expanded)
2016
2016Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses
Ucarli C., Mcguffin L. J., Caputlu S., Aravena A., Guerl F.
SCIENTIFIC REPORTS
, vol.6, 2016 (SCI-Expanded)
2015
2015Enhancing T-DNA Transfer Efficiency in Barley (Hordeum vulgare L.) Cells Using Extracellular Cellulose and Lectin
Gurel F., Ucarli C., Tufan F., Kalaskar D. M.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
, vol.176, pp.1203-1216, 2015 (SCI-Expanded)
2015
2015Discovery of Dhn3 variants in wild barley (Hordeum spontaneum) by high-resolution melting (HRM) technology
Ucarli C., Poyraz N., Gurel A. F.
TURKISH JOURNAL OF BIOLOGY
, vol.39, pp.758-764, 2015 (SCI-Expanded)
2015
2015Expression and genomic integration of transgenes after Agrobacterium-mediated transformation of mature barley embryos
Ucarli C., Tufan F., Gurel F.
GENETICS AND MOLECULAR RESEARCH
, vol.14, pp.1096-1105, 2015 (SCI-Expanded)
2015
2015SILENCING OF G-PROTEIN alpha-SUBUNIT IN BARLEY (Hordeum vulgare L.) BY VIGS AND ITS EFFECT ON THE PLANT GROWTH
SHAHID M. Q., Ucarli C., Karlik E., Uzuner S., Gurel F.
TURKISH JOURNAL OF FIELD CROPS
, vol.20, no.2, pp.259-264, 2015 (SCI-Expanded)
Articles Published in Other Journals
2022
2022Effects of Exogenous Linoleic Acid on Barley (Hordeum vulgare L.) Seedlings Under Salinity
Uçarlı C.
Iğdır Üniversitesi Fen Bilimleri Enstitüsü Dergisi , vol.12, no.3, pp.1790-1800, 2022 (Peer-Reviewed Journal)
2021
2021Physiological and Molecular Effects of Exogenous Gibberellin (GA3) Treatment on Germination of Barley Seeds under Salt Stress
Uçarlı C.
Adıyaman University Journal of Science , vol.11, no.2, pp.227-243, 2021 (Peer-Reviewed Journal)
2019
2019Short-term Effects of Exogenous Application of Ascorbic Acid on Barley (Hordeum vulgare L.) Seedlings under Salinity Stress
Uçarlı C.
International Journal of Environmental Research and Technology
, vol.2, no.2, pp.37-73, 2019 (Peer-Reviewed Journal)
2015
2015Analysis of expressed sequence tags from cDNA library of Fusarium culmorum infected barley (Hordeum vulgare L.) roots
Tufan F., Ucarli C., Gurel F.
BIOINFORMATION
, vol.11, no.1, pp.34-38, 2015 (ESCI)
2011
2011Assessment of barley (Hordeum vulgare L.) mature embryos for Agrobacterium-mediated transformation
Karakaş Ö., UÇARLI C., Gözükirmizi N., Gürel F.
Journal of Applied Biological Sciences
, vol.5, no.1, pp.55-58, 2011 (Scopus)
Refereed Congress / Symposium Publications in Proceedings
2021
2021ALLEVIATION OF SALT STRESS ON GERMINATION OF WHEAT SEEDS BY BACILLUS MEGATERIUM
Uçarlı C.
6th INTERNATIONAL ZEUGMA CONFERENCE ON SCIENTIFIC RESEARCHES, Gaziantep, Turkey, 19 - 20 June 2021, pp.55-56
2021
2021DETECTION OF THE GA2-OXIDASE (GA2OX3) MUTATIONS IN EMS-MUTAGENIZED POPULATION OF BREAD WHEAT
Uçarlı C.
VI. INTERNATIONAL BATTALGAZİ SCIENTIFIC STUDIES CONGRESS, Malatya, Turkey, 8 - 09 May 2021, pp.58-59
2020
2020Determination of the reduced height-1 (Rht1) variants in EMS-mutagenized population of wheat using high resolution melting (HRM) analysis
Uçarlı C.
3rd International Eurasian Conference on Biological and Chemical Sciences (EurasianBioChem 2020), Ankara, Turkey, 19 - 20 March 2020, pp.53
2019
2019Short-term Effects of Exogenous Application of Ascorbic Acid on Barley (Hordeum vulgare L.) Seedlings under Salinity Stress
Uçarlı C.
3rd International Plant Science and Technology Congress, Afyonkarahisar, Turkey, 18 - 20 December 2019, vol.2, no.3, pp.37-43
2019
2019Effects of Exogenous Gibberellin (GA3) Treatment on Genes Involved in Gibberellin Metabolism During Germination of Barley Seeds Under Salt Stress
UÇARLI C.
HASAT International Agriculture and Forest Congress, Ankara, Turkey, 21 - 23 June 2019, pp.891-900
2018
2018A mutation screening and genotyping by high-resolution melting (HRM) to detect delta-6-desaturase (D-6-D) variants in Argania spinosa,
Louati M., UÇARLI C., ARIKAN B., Hannach, A. S., Tetlow I., TURGUT KARA N.
2018 Eastern Regional Meeting, London, Canada, 24 November 2018, pp.32
2016
2016Cloning and Characterization of HvVIP1 (VirE2-Interacting Protein 1) in Barley
El Sarraf N., Uçarlı C., Gürel A. F.
Uluslararası Katılımlı Türkiye VI. Bitki Koruma Kongresi, Konya, Turkey, 5 - 08 September 2016, pp.648
2016
2016Improving the Agrobacterial Attachment to Monocot Cells Using a Cellulose Fibrous Network
EL SARRAF N., UÇARLI C., TUFAN F., GÜREL A. F.
Global Biotechnology Congress 2016, Boston, United States Of America, 22 - 25 August 2016, pp.183
2015
2015Effects of ferrulic acid, Guaicol and Mizoribine on Agrobacterium-Mediated Transformaiton Efficiency in Barley
Tufan F., Uçarlı C., Gürel A. F.
International Workshop on Greeen Biotechnology, Kocaeli, Turkey, 21 - 23 September 2015, pp.58
2015
2015"Allelic diversity in Hodeum spontaneum at the Dhn3 locus: a major dehydration stress-inducible gene in barley
Çaputlu s., UÇARLI C., Yörük E., KARAER UZUNER S., GÜREL A. F.
Botany 2015, Edmonton, Canada, 25 - 29 July 2015, pp.367
2014
2014Use of High-Resolution Melting (HRM)Analysis For Screening DHN3 Mutations in Wild Barley
Uçarlı C., Poyraz N., Gürel A. F.
Genom Varyasyonları: Uygulama ve Veri Analizleri Sempozyumu, İstanbul, Turkey, 15 - 16 September 2014, pp.19
2011
2011Physiological responses of elite barley (Hordeum vulgare L.) cultivars to salt stress at germination stage
Yoruk E., Tufan F., Ucarli C., Gurel F.
European Biotechnology Congress, İstanbul, Turkey, 28 September - 01 October 2011, vol.22
2011
2011T-DNA integration site analysis in transformed barley (Hordeum vulgare L.) by Tail-PCR
Ucarli C., Gurel F.
European Biotechnology Congress, İstanbul, Turkey, 28 September - 01 October 2011, vol.22
Books & Book Chapters
2022
2022Mikrobiyom Analizinde Metagenomik Yaklaşımlar
Uçarlı C.
in: Fen Bilimleri ve Matematikte Güncel Araştırmalar, Akgül Hasan,Kütük Murat,Sağlıker Hüsniye,İyit Neslihan,Erten Füsun, Editor, Gece Kitaplığı, Ankara, pp.1-22, 2022
2020
2020Effects of Salinity on Seed Germination and Early Seedlings
Uçarlı C.
in: Abiotic Stress in Plants, Dr. Shah Fahad, Editor, IntechOpen, London, pp.1-21, 2020
2016
2016Transcriptomic responses of barley (Hordeum vulgare L.) to drought and salinity
GÜREL A. F., ÖZTÜRK Z. N., UÇARLI C.
in: Plant Omics: Trends and Applications, Hakeem K.R., Tombuloglu H., Tombuloglu G., Editor, Springer International Publishing, Zürih, pp.159-188, 2016
Other Publications
2015
2015Hordeum vulgare subsp. spontaneum in Turkey: characterization in a laboratory environment
GÜREL A. F., UÇARLI C., Yörük E., Karagöz A.
Technical Report, pp.31-32, 2015
Supported Projects
2023 - 2025
2023 - 2025Fındıkta (Corylus avellana L.) WUSCHEL-Related Homeobox (WOX) gen ailesinin in silico belirlenmesi ve adventif kök oluşum sürecindeki ekspresyon profilinin analiz edilmesi
Project Supported by Higher Education Institutions
Uçarlı C., Tufan Dülger A. F.(Executive), Yörük E., Şekerli M.
2022 - 2023
2022 - 2023Tuz Stresi Altında Çimlenen Arpa Tohumlarına Bacillus sp Uygulamasının Etkileri
Project Supported by Higher Education Institutions
UÇARLI C. (Executive), ERKENGEZ E., KALKAN S. N.
2022 - 2023
2022 - 2023Tuz Stresi Altında Çimlenen Arpa Tohumlarına Ekzojen Ozmoprotektan Uygulamasının Etkileri
Project Supported by Higher Education Institutions
UÇARLI C. (Executive), AKBULUT E., ASLAN A.
2017 - 2019
2017 - 2019Tuz Stresi Altındaki Arpa Tohumlarında Eksojen Gibberellik Asit Uygulamalasının Çimlenme Üzerindeki Etkisinin İncelenmesi
Project Supported by Higher Education Institutions
UÇARLI C. (Executive)
2017 - 2018
2017 - 2018Bitkilerde G protein sinyal yolağının tuz stresi ve kök büyümesine etkisinin araştırılması
Project Supported by Higher Education Institutions
GÜREL A. F. (Executive), UÇARLI C., KARAHALİL B., ÇEPNİ YÜZBAŞIOĞLU F. E.
2017 - 2018
2017 - 2018Arabidopsis'te NaCl'nin Pigment Metabolizması Üzerindeki Etkisinin Transkriptomik Düzeyinde İncelenmesi
Project Supported by Higher Education Institutions
TURGUT KARA N. (Executive), ARIKAN B., UÇARLI C., ÇAKIR Ö.
2016 - 2017
2016 - 2017IMPROVING THE AGROBACTERIAL ATTACHMENT TO MONOCOT CELLS USING A CELLULOSE FIBROUS NETWORK
Project Supported by Higher Education Institutions
GÜREL A. F. (Executive), UÇARLI C., TUFAN F., SARRAF N.
2013 - 2016
2013 - 2016MOLEKÜLER BİYOTEKNOLOJİ LABORATUVARININ KURULMASI
Project Supported by Higher Education Institutions
ARDA E. Ş. N. (Executive), UÇARLI C., ARICAN E., ALBAYRAK G., GÜREL A. F., ARI Ş., et al.
2013 - 2016
2013 - 2016Tuz Stresi Etkisindeki Arpa Bitkilerinin Gen Anlatım Profilleri
Project Supported by Higher Education Institutions
GÜREL A. F. (Executive), UÇARLI C.
Awards
June 2016
June 20162015 Başarılı Araştırıcı Ödülü
İstanbul Üniversitesi
Congress and Symposium Activities
19 June 2021 - 20 June 2021
19 June 2021 - 20 June 2021
6th INTERNATIONAL ZEUGMA CONFERENCE ON SCIENTIFIC RESEARCHES
Invited Speaker
Gaziantep-Turkey
08 May 2021 - 09 May 2021
08 May 2021 - 09 May 2021VI. INTERNATIONAL BATTALGAZİ SCIENTIFIC STUDIES CONGRESS
Invited Speaker
Malatya-Turkey
19 March 2020 - 20 March 2020
19 March 2020 - 20 March 20203rd International Eurasian Conference on Biological and Chemical Sciences (EurasianBioChem 2020)
Invited Speaker
Ankara-Turkey
18 December 2019 - 20 December 2019
18 December 2019 - 20 December 2019
3rd INTERNATIONAL CONGRESS on PLANT SCIENCE and TECHNOLOGY
Invited Speaker
Afyonkarahisar-Turkey
21 June 2019 - 23 June 2019
21 June 2019 - 23 June 2019
HASAT INTERNATIONAL AGRICULTURE AND FOREST CONGRESS
Invited Speaker
Ankara-Turkey
01 May 2017 - 01 May 2017
01 May 2017 - 01 May 2017ASM Virtual Workshop on Culture of Responsibility
Attendee
İstanbul-Turkey
01 October 2015 - 01 October 2015
01 October 2015 - 01 October 2015Yüksek Nitelikli Bilimsel Makale Geliştirme Çalıştayı
Attendee
İstanbul-Turkey
01 May 2013 - 01 May 2013
01 May 2013 - 01 May 2013İlaç Sentezi ve Sektörde İlaç
Attendee
İstanbul-Turkey
01 September 2011 - 01 September 2011
01 September 2011 - 01 September 2011Avrupa Biyoteknoloji Kongresi
Attendee
İstanbul-Turkey
Invited Talks
May 2023
May 2023