Publications & Works

Publication Network

Published journal articles indexed by SCI, SSCI, and AHCI

Molecular docking studies of YKT tripeptide and drug delivery system with poly(epsilon-caprolactone) nanoparticles

Bicak B. , Kecel-Gunduz S. , Budama-Kilinc Y., Ozdemir B.
ARCHIV DER PHARMAZIE, vol.355, 2022 (Journal Indexed in SCI) identifier identifier identifier

STRUCTURAL, SPECTROSCOPIC, IN SILICO, IN VITRO AND DNA BINDING EVALUATIONS OF TYROSYL-LYSYL-THREONINE

Bıçak B. , Kecel Gündüz S. , Kılınç Y., Imhof P., Gök B., Akman G. , et al.
Journal Of Biomolecular Structure & Dynamics, vol.1, no.1, pp.1, 2021 (Journal Indexed in SCI)

Structural Characterization and Drug Delivery System of Natural Growth-Modulating Peptide against Glioblastoma Cancer

Kılınç Y., Kecel Gündüz S. , Çakır Koç R., Aslan B., Bıçak B. , Kökcü Y., et al.
International Journal Of Peptide Research And Therapeutics, vol.1, no.1, pp.1-45, 2021 (Journal Indexed in SCI Expanded) Sustainable Development

PEPTIDE BASED NANO-DRUG CANDIDATE FOR CANCER TREATMENT: PREPARATION, CHARACTERIZATION, IN VITRO AND IN SILICO EVALUATION

Bıçak B. , Kılınç Y., Kecel Gündüz S. , Zorlu T., Akman G.
JOURNAL OF MOLECULAR STRUCTURE, vol.1240, pp.130573, 2021 (Journal Indexed in SCI Expanded) Sustainable Development

Computer-Aided Anticancer Drug Design: In vitro and In silico Studies of New Iminocoumarin Derivative

Kecel Gündüz S. , Kılınç Y., Gok B., Bıçak B. , Akman G. , Arvas B., et al.
JOURNAL OF MOLECULAR STRUCTURE, no.1, pp.1, 2021 (Journal Indexed in SCI Expanded)

New nanodrug design for cancer therapy: Its synthesis, formulation, in vitro and in silico evaluations

KILINÇ Y., Kecel-Gunduz S. , Ozdemir B., BIÇAK B. , AKMAN G. , ARVAS B., et al.
ARCHIV DER PHARMAZIE, vol.353, no.11, 2020 (Journal Indexed in SCI) Sustainable Development identifier identifier identifier

In Silico design of AVP (4–5) peptide and synthesis, characterization and in vitro activity of chitosan nanoparticles

Kecel-Gunduz S. , Budama-Kilinc Y., Çakır Koç R., Zorlu T., Bicak B. , Kokcu Y., et al.
DARU, Journal of Pharmaceutical Sciences, vol.28, pp.139-157, 2020 (Journal Indexed in SCI Expanded) Sustainable Development identifier identifier identifier

Structural analysis, molecular dynamics and docking calculations of skin protective tripeptide and design, characterization, cytotoxicity studies of its PLGA nanoparticles

Kokcu Y., Kecel-Gunduz S. , Budama-Kilinc Y., Cakir-Koc R., Bicak B. , Zorlu T., et al.
Journal of Molecular Structure, vol.1200, 2020 (Journal Indexed in SCI Expanded) Sustainable Development identifier identifier

In silico Analysis of Sulpiride, Synthesis, Characterization and In vitro Studies of its Nanoparticle for the Treatment of Schizophrenia

Kecel-Gunduz S. , Budama-Kilinc Y., Cakir-Koc R., Zorlu T., Bıçak B. , Kokcu Y., et al.
CURRENT COMPUTER-AIDED DRUG DESIGN, vol.16, no.2, pp.104-121, 2020 (Journal Indexed in SCI) identifier identifier identifier

Papain Loaded Poly(epsilon-Caprolactone) Nanoparticles: In-silico and In-Vitro Studies

Budama-Kilinc Y., Cakir-Koc R., Kecel-Gunduz S. , Zorlu T., Kokcu Y., Bicak B. , et al.
JOURNAL OF FLUORESCENCE, vol.28, pp.1127-1142, 2018 (Journal Indexed in SCI) identifier identifier identifier

Computational design of Phe-Tyr dipeptide and preparation, characterization, cytotoxicity studies of Phe-Tyr dipeptide loaded PLGA nanoparticles for the treatment of hypertension

Kecel-Gunduz S. , Budama-Kilinc Y., Koc R. C. , Kokcu Y., Bicak B. , Aslan B., et al.
Journal of Biomolecular Structure and Dynamics, vol.36, pp.2893-2907, 2018 (Journal Indexed in SCI Expanded) Sustainable Development identifier identifier identifier

Novel NAC-loaded poly(lactide-coglycolide acid) nanoparticles for cataract treatment: Preparation, characterization, evaluation of structure, cytotoxicity, and molecular docking studies

Budama-Kılınc Y., Cakır-Koc R., Kecel-Gunduz S. , Kokcu Y., Bicak B. , Mutlu H., et al.
PeerJ, vol.2018, 2018 (Journal Indexed in SCI Expanded) identifier identifier identifier

Structural and spectroscopic investigation on antioxidant dipeptide, L-Methionyl-L-Serine: A combined experimental and DFT study

Kecel-Gunduz S. , Bicak B. , Celik S. , Akyuz S., Ozel A.
Journal of Molecular Structure, vol.1137, pp.756-770, 2017 (Journal Indexed in SCI Expanded) identifier identifier

Articles Published in Other Journals

IN SILICO ANALYSIS FOR CHARACTERIZING THE STRUCTURE AND BINDING PROPERTIES OF ALA-HIS-LYS (AHK) TRIPEPTIDE

Kecel Gündüz S. , Koç E., Bıçak B. , Kökcü Y., Özel A. , Akyüz S.
The Online Journal of Science and Technology, vol.10, no.3, pp.111-120, 2020 (Refereed Journals of Other Institutions)

The Interaction of Ile-Phe Dipeptide with Phosphatidylinositide 3-Kinase (PI3K): Molecular Dynamics and Molecular Docking Studies

Bıçak B. , Kokcu Y., Kecel Gündüz S. , Özel A. , Akyüz S.
Natural and Engineering Sciences (NESciences), no.1, pp.1, 2020 (Refereed Journals of Other Institutions)

Molecular Docking and Molecular Dynamics Studies of L-Glycyl-L-Glutamic Acid Dipeptide

Bıçak B. , Kecel Gündüz S. , Kokcu Y., Özel A. , Akyüz S.
Bilge International Journal of Science and Technology Research, vol.3, no.1, pp.1-9, 2019 (Refereed Journals of Other Institutions)

COMPUTERISED DESIGNING OF DOXORUBICIN WITH BREAST CANCER CELLS

Sener L. , Gunduz S. , Şener A., Bicak B. , Kokcu Y., Ozel A. , et al.
JOURNAL OF ISTANBUL FACULTY OF MEDICINE-ISTANBUL TIP FAKULTESI DERGISI, vol.82, no.1, pp.40-46, 2019 (Journal Indexed in ESCI) Sustainable Development identifier

Use of the Comet Assay and Molecular Docking Techniques to Evaluate the Effect of Nicotine in Human Breast Cancer Cell Line

TÜRKER ŞENER L. , KECEL GÜNDÜZ S. , Şener A., Çelikok Y., BIÇAK B. , KÖKCÜ Y., et al.
International Journal of Scientific and Technological Research, vol.4, no.10, pp.1-15, 2018 (Refereed Journals of Other Institutions) Sustainable Development

Refereed Congress / Symposium Publications in Proceedings

GLY-HIS-LYS TRİPEPTİDİNİN ANJİYOTENSİN DÖNÜŞTÜRÜCÜ ENZİM İLE ETKİLEŞİMLERİNİN MOLEKÜLER KENETLENME YÖNTEMİ İLE İNCELENMESİ

Bıçak B. , Kecel Gündüz S.
5. ULUSAL BAŞKENT DİSİPLİNLER ARASI BİLİMSEL ÇALIŞMALAR KONGRESİ, Ankara, Turkey, 21 - 22 June 2022, pp.1

Molecular Docking and ADME Analyses of Antihypertensive Dipeptide

Bıçak B. , Kecel Gündüz S.
14. International Conference on Mathematics Engineering Natural and Medical Sciences-EJONS, Paris, France, 6 - 07 July 2022, pp.1

MOLECULAR DOCKING INVESTIGATION OF PIXANTRONE WITH B-DNA DODECAMER

Saları A., Kandemir M. C. , BIÇAK B. , KECEL GÜNDÜZ S.
Türk Fizik Derneği 35. Uluslararası Fizik Kongresi, Muğla, Turkey, 4 - 08 September 2019, pp.331

MOLECULAR DOCKING STUDIES OF PHENYTOIN, MEPHENYTOIN, AND ETHOTOIN WITH CYTOCHROME P450 3A4

Kandemir M. C. , Saları A., BIÇAK B. , KECEL GÜNDÜZ S.
Türk Fizik Derneği 35. Uluslararası Fizik Kongresi, Muğla, Turkey, 4 - 08 September 2019, pp.331

DNA INTERACTION OF SOME HYDANTOIN-BASED DRUGS WITH MOLECULAR DOCKING CALCULATIONS

Kandemir M. C. , Saları A., BIÇAK B. , KECEL GÜNDÜZ S.
Türk Fizik Derneği 35. Uluslararası Fizik Kongresi, Muğla, Turkey, 4 - 08 September 2019, pp.158

MOLECULAR DOCKING CALCULATIONS OF PIXANTRONE WITH TOPOISOMERASE II

Saları A., Kandemir M. C. , BIÇAK B. , KECEL GÜNDÜZ S.
Türk Fizik Derneği 35. Uluslararası Fizik Kongresi, Muğla, Turkey, 4 - 08 September 2019, pp.166

THEORETICAL CONFORMATIONAL ANALYSIS OF L-ISOLEUCYL-L-PHENYLALANINE DIPEPTIDE

BIÇAK B. , KECEL GÜNDÜZ S. , ÖZEL A.
1st International Symposium on Graduate Research in Science, İstanbul, Turkey, 4 - 06 October 2018, pp.9

MOLECULAR MODELING OF FAGAAGSAKSAAGTASHVSI PEPTIDE

KÖKCÜ Y., BIÇAK B. , KECEL GÜNDÜZ S. , ÖZEL A.
Turkish Physical Society 33 th International Physics Congress, Muğla, Turkey, 6 - 09 September 2017, pp.1

MOLECULAR DYNAMIC AND DOCKING STUDIES OF RGD PEPTIDE

BIÇAK B. , KÖKCÜ Y., KECEL GÜNDÜZ S. , ÖZEL A.
Turkish Physical Society 33 th International Physics Congress, Muğla, Turkey, 6 - 09 September 2017, pp.1

STRUCTURAL ANALYSIS OF SDKGATLTIKKEAFPAESKS PEPTIDE

BIÇAK B. , KÖKCÜ Y., KECEL GÜNDÜZ S. , ÖZEL A.
Turkish Physical Society 33 th International Physics Congress, Muğla, Turkey, 6 - 09 September 2017, pp.1

COMPUTATIONAL DESIGN OF IMMUNOGENIC PEPTIDE

KECEL GÜNDÜZ S. , KÖKCÜ Y., BIÇAK B. , ÖZEL A.
Turkish Physical Society 33 th International Physics Congress, Muğla, Turkey, 6 - 09 September 2017, pp.1

DETERMINATION OF CONFORMATIONAL AND STRUCTURAL FEATURES OF L-GLY-L-GLU DIPEPTIDE

BIÇAK B. , KECEL GÜNDÜZ S. , ÖZEL A.
32nd International Physics Congress, Muğla, Turkey, 6 - 09 September 2016, pp.1

VIBRATIONAL SPECTROSCOPIC INVESTIGATION OF PROLINE-TYROSINE DIPEPTIDE

BIÇAK B. , KECEL GÜNDÜZ S.
10th International Student Conference Of The Balkan Physical Union, İstanbul, Turkey, 3 - 05 September 2013, pp.18

Vibrational Spectroscopic Studies Of Analgesic Peptide

BIÇAK B. , KECEL GÜNDÜZ S.
Turkish Physical Society 30 th International Physics Congress, İstanbul, Turkey, 2 - 05 September 2013, pp.1

Books & Book Chapters

Molecular Modeling of Nanoparticles

Bıçak B. , Gök B., Kecel Gündüz S. , Kılınç Y.
in: Computer Aided Pharmaceutics and Drug Delivery, Vikas Anand Saharan, Editor, Springer, London/Berlin , New Delhi, pp.35-50, 2021

Targeted Drug Delivery in Cancer Treatment

Bıçak B. , Kecel Gündüz S. , Özel A.
in: Advancements in Cancer Therapeutics , Dr. Sumit Kumar,Dr. Saurabh Verma,Prof. Moshahid Alam Rizvi, Editor, IGI Global, Pennsylvania, pp.382-412, 2021 Sustainable Development

Computational Drug Design Methods Used in Cancer Studies

Kecel Gündüz S. , Bıçak B. , Özel A.
in: Advancements in Cancer Therapeutics, Dr. Sumit Kumar,Dr. Saurabh Verma,Prof. Moshahid Alam Rizvi, Editor, IGI Global, Pennsylvania, pp.89-115, 2021 Sustainable Development

Drug delivery nanosystems for neural regenerative medicine

Kecel Gündüz S. , Bıçak B. , Özel A.
in: NEURAL REGENERATIVE NANOMEDICINE, Mehdi Razavi, Editor, Academic Press , Oxford, pp.89-116, 2020