Assoc. Prof. MURAT PEKMEZ


Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü

Department of Molecular Biology and Genetics


WoS Research Areas: Life Sciences (Life), Molecular Biology & Genetics, Biochemistry & Molecular Biology


Scopus Research Areas: Molecular Biology, General Biochemistry, Genetics and Molecular Biology


Avesis Research Areas: Life Sciences, Molecular Biology and Genetics, Moleculer Biology of Cancer, Natural Sciences


Names in Publications: Pekmez Murat

Email: mpekmez@istanbul.edu.tr
Office Phone: +90 212 455 5700 Extension: 15196
Fax Phone: +90 212 455 5811
Web: http://www.istanbul.edu.tr/fen/mol/personelakafen.php?id=384
Office: Moleküler Biyoloji ve Genetik Bölümü G-BLOK 117
Address: İstanbul Üniversitesi Fen Fakültesi,Moleküler Biyoloji ve Genetik Bölümü, Vezneciler-İstanbul 34134

Metrics

Publication

69

Publication (WoS)

39

Publication (Scopus)

36

Citation (WoS)

326

H-Index (WoS)

12

Citation (Scopus)

358

H-Index (Scopus)

10

Project

52

Thesis Advisory

3

Open Access

3
UN Sustainable Development Goals

Education

2004 - 2010

2004 - 2010

Doctorate

Istanbul University, Institute of Graduate Studies In Sciences, Moleküler Biyoloji Ve Genetik Bölümü, Moleküler Biyoloji Ve Genetik Anabilidalı, Turkey

2001 - 2004

2001 - 2004

Postgraduate

Istanbul University, Institute of Graduate Studies In Sciences, Biyoloji Bölümü, Moleküler Biyoloji Ve Genetik Anabilimdalı, Turkey

1997 - 2001

1997 - 2001

Undergraduate

Istanbul University, Faculty of Science, Biyoloji, Turkey

Dissertations

2010

2010

Doctorate

"Glioma Hücrelerinde İndometasinin Meydana Getirdiği Moleküler Hasarlar Üzerine E Vitamininin Etkileri"

Istanbul University, Fen Fakültesi, Fen Bilimleri Enstitüsü, Moleküler Biyoloji Ve Genetik Bölümü/Moleküler Biyoloji Ve Genetik Anabilimdalı

2004

2004

Postgraduate

"Oksidatif Stres Uygulanmış Schizosaccharomycespombe’de Moleküler Çalışmalar"

Istanbul University, Fen Fakültesi, Fen Bilimleri Enstitüsü, Biyoloji Bölümü, Moleküler Biyoloji Ve Genetik Anabilimdalı

Foreign Languages

B2 Upper Intermediate

B2 Upper Intermediate

English

Research Areas

Life Sciences

Molecular Biology and Genetics

Moleculer Biology of Cancer

Natural Sciences

Research Areas Based on Academic Activities

Avesis Research Areas

    WoS Research Areas

      Scopus Research Areas

        Academic Positions

        2018 - Present

        2018 - Present

        Assistant Professor

        Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü

        2006 - Present

        2006 - Present

        Research Assistant

        Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü

        2017 - 2018

        2017 - 2018

        Assistant Professor

        Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü

        Managerial Experience

        2018 - Present

        2018 - Present

        Deputy Head of Department

        Istanbul University, Faculty of Science, Moleküler Biyoloji ve Genetik Bölümü

        Courses

        Doctorate

        Doctorate

        PROTEOMICS

        Postgraduate

        Postgraduate

        Apoptozun Moleküler Teknikler Kullanılarak Belirlenmesi

        Protein Biyokimyası

        Protein Saflaştırma Teknikleri

        Kanser Biyokimyası Sustainable Development

        Undergraduate

        Undergraduate

        Proteomics and Metabolomics

        Methods in Molecular Biology II

        Bitirme Projesi II

        Fermantasyon Teknolojisi

        Bitirme Projesi I

        Glikobiyoloji

        Bitirme Projesi

        Scientific Research Techniques and Publication Ethics

        Stres Biyolojisi

        Biochemistry I

        Articles

        All (40)
        SCI-E, SSCI, AHCI (35)
        SCI-E, SSCI, AHCI, ESCI (36)
        ESCI (1)
        Scopus (36)
        TRDizin (4)
        Other Publications (1)

        Papers Presented at Peer-Reviewed Scientific Conferences

        2022

        2022

        1. Tiroid Kanseri Hücrelerinde N-bağlı Glikoproteinlerin Glikomik Analizi Yeni Potansiyel Terapötik ve Tanısal Hedefleri İşaret Eder

        Bektaş S., Pekmez M., Şanlı K., Sancar S., Arda Pirinççi B. P., Arda E. Ş. N., et al.

        11. ULUSAL MOLEKÜLER BİYOLOJİ VE BİYOTEKNOLOJİ KONGRESİ, İstanbul, Turkey, 7 - 09 October 2022, pp.67, (Summary Text) Sustainable Development

        2020

        2020

        3. POTENTIAL APPLICATIONS OF PLANT LECTINS AGAINST SARS-CoV-2

        Pekmez M.

        The Sixth International Mediterranean Symposium on Medicinal and Aromatic Plants, İzmir, Turkey, 15 - 17 October 2020, pp.40, (Summary Text) Creative Commons License Sustainable Development

        2019

        2019

        4. Investigation of Thymoquinone usability on wound healing

        Milat N. S., Şengelen A., PEKMEZ M.

        7th International Congress of the Molecular Biology Association of Turkey, İstanbul, Turkey, 27 - 29 September 2019, vol.43, no.5, pp.10, (Full Text)

        2019

        2019

        5. Suppression of Hsp60 and Hsp70 increases the anti-tumor effectsof resveratrol in human glioblastoma cells

        Önay Uçar E., Şengelen A., Mertoğlu E., Pekmez M., Arda E. Ş. N.

        7th International Congress of the Molecular Biology Association of Turkey, İstanbul, Turkey, 27 - 29 September 2019, no.36, pp.100, (Summary Text)

        2019

        2019

        6. Investigation of cytotoxic activity of cerulenin and vitamin E combination in U87 glioma cell line

        Uzunalioğlu N., MERTOĞLU E., PEKMEZ M.

        7th International Congress of the Molecular Biology Association of Turkey, İstanbul, Turkey, 27 - 29 September 2019, no.42, pp.106, (Full Text)

        2017

        2017

        7. The effects of vitamin E on molecular damages induced by indomethacin in glioma cells

        ARDA E. Ş. N., PEKMEZ M., ÖNAY UÇAR E.

        EACR-AACR-SIC SPECIAL CONFERENCE 2017, Floransa, Italy, 24 - 27 June 2017, pp.105, (Full Text)

        2016

        2016

        8. Protective effects of Sanicula europaea extracts on nuclear DNA damage

        ÖNAY UÇAR E., PEKMEZ M., MERTOĞLU E., Dalyan L., ARDA E. Ş. N.

        24th Biennial Congress of the European Association for Cancer Research, Manchester, United Kingdom, 9 - 12 July 2016, vol.61, no.1, (Full Text)

        2013

        2013

        9. Cytotoxic Effects Of Physalis Peruviana Ethanol Extracts On Hela Cells

        Fidan K., Candar Çakır B., PEKMEZ M., ÇAKIR Ö.

        1st Mediterranean Symposium on Medicinal and Aromatic Plants (MESMAP-2013), Cyprus (Kktc), 1 - 04 April 2013, pp.240, (Full Text)

        2011

        2011

        11. Oxidative stress studies with IMPDH-overexpressed S. pombe

        Karaer Uzuner S., Seven M., Şişko S., PALABIYIK B., Pekmez M., Topal Sarıkaya A.

        The 6th International Fission Yeast Meeting, United States Of America, 1 - 04 June 2011, vol.1, pp.232, (Full Text)

        2009

        2009

        12. Antioxidant activity of whey and whey hydrolysates.

        Arda E. Ş. N., Önay Uçar E., Pekmez M., Yılmaz A. M., Yalçın A. S.

        34th FEBS Congress, Praha, Czech Republic, 4 - 09 July 2009, pp.299, (Summary Text)

        2007

        2007

        13. Free radical scavenging activity and protective effects of Alchemilla vulgaris (L.)

        Hamad I., EROL-DAYI O., Pekmez M., Onay-Ucar E., Arda N.

        13th European Congress on Biotechnology (ECB 13), Barcelona, Spain, 16 - 19 September 2007, vol.131, (Summary Text) identifier

        2007

        2007

        14. Fission yeast as a model for ALS disease

        Karaer S., Tarhan C., Hamad I., Pekmez M., Arda N., Sarikaya A. T.

        13th European Congress on Biotechnology (ECB 13), Barcelona, Spain, 16 - 19 September 2007, vol.131, (Summary Text) identifier

        2006

        2006

        15. Antioxidant potential of whey protein fractions

        Bayram T., Pekmez M., Onay-Ucar E., Arda N., YALCIN S.

        31st Congress of the Federation-of-European-Biochemical-Societies (FEBS), İstanbul, Turkey, 24 - 29 June 2006, vol.273, pp.299, (Summary Text) identifier

        2005

        2005

        16. Studying on Zinc Toxicty and Antioxidant Defense Mechanism in Schizosaccharomyces pombe

        TARHAN Ç., PEKMEZ M., Topal SARIKAYA A.

        The XXIInd International Conference on Yeast Genetics and Molecular Biiology, Slovakia, 1 - 04 September 2005, pp.36, (Full Text)

        2005

        2005

        17. Çinko Toksisitesi ve Antioksidan Savunma Mekaniizmaları Üzerine Çlaışmalar

        TARHAN Ç., PEKMEZ M., Topal SARIKAYA A.

        XIV. Ulusal Biyoteknoloji Kongresi, Eskişehir, Turkey, 1 - 04 September 2005, pp.322, (Full Text)

        2002

        2002

        18. Ökseotunun (Viscum album ssp.album) Pigment İçeriği Üzerinde Konakçı Ağaçların Etkisi

        Pekmez M., Önay Uçar E., Arda E. Ş. N.

        XVI. Ulusal Biyoloji Kongresi, Malatya, Turkey, 4 - 07 September 2002, pp.173, (Summary Text)

        2002

        2002

        19. Antioxidant potential of Some Turkish Medicinal Plants

        Arda E. Ş. N., Önay Uçar E., Pekmez M., Karagöz A.

        2rd International Meeting on Free adicals in Health and Disease, İstanbul, Turkey, 8 - 12 May 2002, pp.2, (Summary Text)

        Books

        2023

        2023

        1. Exosomal Heat Shock Proteins in Cancer

        Önay Uçar E., Mertoğlu Kamalı E., Kıyga E., Şengelen A., Pekmez M., Arda E. Ş. N.

        in: Heat Shock Proteins (HSP) in Cellular Communication and Signaling, Heat Shock Proteins Volume 26, Alexzander A.A. Asea,Punit Kaur, Editor, Scientific Scholar LLC, New York, pp.139-152, 2023

        2022

        2022

        2. Bölüm 11 Yeni Virüslerin Ortaya Çıkışı

        Arda E. Ş. N., Önay Uçar E., Pekmez M.

        in: Virolojinin Prensipleri Cilt II Patogenez ve Kontrol, Hikmet Geçkil,Ekrem Atalan, Editor, Palme Yayın Dağıtım, Ankara, pp.362-385, 2022

        2022

        2022

        3. Bölüm 12 Hücre İçi Trafik

        Arda E. Ş. N., Önay Uçar E., Pekmez M.

        in: Virolojinin Prensipleri Beşinci Baskıdan Çeviri CİLT I Moleküler Biyoloji, Hikmet Geçkil, Editor, Palme Yayın Dağıtım, Ankara, pp.399-432, 2022

        2022

        2022

        4. What We Know About the Role of Heat Shock Proteins in Coronavirus Infection: A Remarkable Prognostic Factor or a Therapeutic Strategy?

        ŞENGELEN A., DEMİRGAN S., Aksüt Y., PEKMEZ M., ARDA E. Ş. N., ÖNAY UÇAR E.

        in: Heat Shock Proteins (HSP) and Coronavirus, Heat Shock Proteins Volume 25, Asea Alexzander A.A., Kaur Punit, Editor, ISBN: 979-8-9873112-0-2, pp.36-65, 2022 Sustainable Development

        2019

        2019

        5. Can Hsp Targeted Gene Therapy Be a New Hope for Gliomas?

        ÖNAY UÇAR E., Şengelen A., Güngör E., MERTOĞLU E., PEKMEZ M., ARDA E. Ş. N.

        in: Heat Shock Proteins in Neuroscience, Heat Shock Proteins Volume 20, Asea A.A.A., Kaur P., Editor, Springer-Verlag , Cham, pp.209-230, 2019

        2018

        2018

        6. Suppression of HSP70 Expression by Quercetin and Its Therapeutic Potential Against Cancer

        Önay Uçar E., Şengelen A., Mertoğlu E., Pekmez M., Arda N.

        in: HSP70 in Human Diseases and Disorders, Asea A.A.A.,Kaur P., Editor, Springer, Zug, pp.361-379, 2018 Sustainable Development

        2018

        2018

        7. HSP70 in Human Diseases and Disorders

        Önay Uçar E., Şengelen A., Mertoğlu E., Pekmez M., Arda E. Ş. N.

        in: Suppression of HSP70 Expression by Quercetin and Its Therapeutic Potential Against Cancer, Asea A.A.A,Kaur P., Editor, Springer, London/Berlin , Zug, pp.361-379, 2018 Sustainable Development

        2017

        2017

        8. Biyoteknolojide Proteomik Uygulamaları

        ARDA E. Ş. N., ÖNAY UÇAR E., PEKMEZ M.

        in: Güncel Biyoteknoloji ve Uygulamaları, Munis Dündar, Haydar Bağış, Editor, Erciyes Üniversitesi Yayınları, Kayseri, pp.279-294, 2017

        2017

        2017

        9. Targeting of Heat Shock Proteins by Natural Products in Cancer

        ÖNAY UÇAR E., PEKMEZ M., ARDA E. Ş. N.

        in: Molecular Oncology: Underlying Mechanisms and Translational Advancements, Farooqi A.A., Ismail M., Editor, Springer-Verlag , Cham, pp.173-193, 2017

        2017

        2017

        10. Targeting of Heat Shock Proteins by Natural Products in Cancer

        ÖNAY UÇAR E., PEKMEZ M., ARDA E. Ş. N.

        in: Molecular Oncology: Underlying Mechanisms and Translational Advancements, Farooqi A.A., Ismail M., Editor, Springer-Verlag , Cham, pp.173-193, 2017 Sustainable Development

        Funded Projects

        2023 - 2024

        2023 - 2024

        Paxlovidin Caco2 Hücre Hattında Otofajiye Olan Etkilerinin Araştırılması

        Project Supported by Higher Education Institutions , BAP Other

        PEKMEZ M. (Executive), ÖZYILDIZ İ. Ş., BALIKÇI S., ŞİMŞEK G.

        2022 - 2024

        2022 - 2024

        Absans epilepsili sıçanlarda T-tipi Ca+2 kanal protein ekspresyonunun araştırılması

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), MUTLU N., ONAT F.

        2022 - 2024

        2022 - 2024

        Anti Kanser İlaç Direnç Mekanizmasında Isı Şoku Proteinlerinin Şaperon Aktivitesinin AraştırılmasıSustainable Development

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), AKSOY D. M.

        2022 - 2023

        2022 - 2023

        "Daucus carota ssp sativus var atrorubens" Ekstresinin Antioksidan Aktivitesinin Araştırılması

        Project Supported by Higher Education Institutions , BAP Other

        PEKMEZ M. (Executive), ÜNER A.

        2021 - 2023

        2021 - 2023

        İndometasin Uygulanmış U87 Glioma Hücrelerinde Endoplazmik Retikulum Stresi ile İlişkili miRNAların Analizi

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), ULAŞ O.

        2019 - 2023

        2019 - 2023

        Nuclear Techniques to Assess the Effect of Coastal Stressors on Marine Organisms

        IAEA International Atomic Energy Agency Supportted Project

        Pekmez M., Kılıç Ö. (Executive), Belivermiş M., Kaptan E.

        2021 - 2022

        2021 - 2022

        Camponotus floridanus'ta BMP Sinyalizasyonu ve Zorunlu Endosimbiyont Varlığında Değişimi

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), MİLAT N. S., RAFİQİ A. M.

        2019 - 2022

        2019 - 2022

        Cerulenin Uygulanmış U87 Glioblastoma Hücre Hattında Endoplazmik Retikulum Stresinin Araştırılması

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), METE Ş. B.

        2018 - 2022

        2018 - 2022

        Balıkçılıkta Iskarta Av Grubu Türlerin Kollajen Karakterizasyonu ve Potansiyel Kullanımı

        Project Supported by Higher Education Institutions , BAP Research Project

        YEMİŞKEN E. (Executive), SANCAR BAŞ S., PEKMEZ M., MENCELOĞLU Y., AVAZ M. S.

        2020 - 2021

        2020 - 2021

        U87 glioblastoma hücre hattında alternatif antijen sunum yolağının şaperon aktivitesi tayini

        Project Supported by Higher Education Institutions , BAP Other

        PEKMEZ M. (Executive), KUGU S., AKSOY D. M., SUCU M. C.

        2019 - 2019

        2019 - 2019

        U87 glioma hücre hattında Cerulenin ve Vitamin C kombinasyonunun sitotoksik aktivitesinin incelenmesi

        Project Supported by Higher Education Institutions , BAP Other

        PEKMEZ M. (Executive), UZUNALİOĞLU N.

        2018 - 2019

        2018 - 2019

        Nigella sativa Etken Maddesi Timokinonun Fibroblast Kültüründeki Sitotoksisitesinin Araştırılması

        Project Supported by Higher Education Institutions , BAP Other

        PEKMEZ M. (Executive), MİLAT N. S.

        2018 - 2019

        2018 - 2019

        Temozolomidin Glioma Hücrelerindeki Eksozomal Stres Proteinleri Üzerine Etkileri

        Project Supported by Higher Education Institutions , BAP MSc

        PEKMEZ M. (Executive), KILCI C.

        2017 - 2019

        2017 - 2019

        Aubrieta ekimiinin Çeşitli Biyolojik Aktivitelerinin Araştırılması

        Project Supported by Higher Education Institutions , BAP Research Project

        ÇEPNİ YÜZBAŞIOĞLU F. E. (Executive), YÜZBAŞIOĞLU İ. S., TURGUT KARA N., ÇAKIR Ö., PEKMEZ M., ARIKAN B., et al.

        2016 - 2018

        2016 - 2018

        Tenacibaculum maritimum izolatlarının filogenetik ve enzimatik karaterlerinin incelenmesi

        Project Supported by Higher Education Institutions , BAP Research Project

        STEINUM T. M. (Executive), KARATAŞ STEINUM S., ARDA E. Ş. N., YARDIMCI R. E., PEKMEZ M., TURGAY E., et al.

        2017 - 2017

        2017 - 2017

        The Effects of Vitamin E on Molecular Damages Induced by Indomethacin in Glioma Cells

        Project Supported by Higher Education Institutions , BAP Other

        ARDA E. Ş. N. (Executive), PEKMEZ M., ÖNAY UÇAR E.

        2016 - 2016

        2016 - 2016

        Protective Effects of Sanicula europaea Extracts on Nuclear DNA Damage

        Project Supported by Higher Education Institutions , BAP Other

        ÖNAY UÇAR E. (Executive), PEKMEZ M., ARDA E. Ş. N., DALYAN L., MERTOĞLU E.

        2013 - 2016

        2013 - 2016

        İndometasin ve E vitamini uygulanmış C6 Sıçan Glioma Hücrelerinde Ölüm Mekanizmalarının Araştırılması

        Project Supported by Higher Education Institutions , BAP Research Project

        PEKMEZ M. (Executive), ARDA E. Ş. N.

        2013 - 2016

        2013 - 2016

        MOLEKÜLER BİYOTEKNOLOJİ LABORATUVARININ KURULMASI

        Project Supported by Higher Education Institutions , BAP Guided

        ARDA E. Ş. N. (Executive), UÇARLI C., ARICAN E., ALBAYRAK G., GÜREL A. F., ARI Ş., et al.

        Memberships and Roles in Scientific Organizations

        2009 - Present

        2009 - Present

        Serbest Radikaller ve Antioksidanlar Araştırma Derneği

        Member

        Peer Reviews in Scientific Publications

        April 2010

        April 2010

        African Journal of Biotechnology

        National Scientific Refreed Journal

        

        Congress and Symposium Activities

        01 April 2013 - 01 April 2013

        01 April 2013 - 01 April 2013

        1st Mediterranean Symposium on Medicinal and Aromatic Plants (MESMAP-2013)

        Attendee

        -Cyprus (Kktc)

        01 October 2011 - 01 October 2011

        01 October 2011 - 01 October 2011

        EACR-Anticancer Agents Research Congress

        Attendee

        Antalya-Turkey

        01 June 2011 - 01 June 2011

        01 June 2011 - 01 June 2011

        The Sixth International Fission Yeast Meeting

        Attendee

        Boston-United States Of America

        01 July 2009 - 01 July 2009

        01 July 2009 - 01 July 2009

        34th FEBS Congress

        Attendee

        Prag-Czech Republic

        01 May 2008 - 01 May 2008

        01 May 2008 - 01 May 2008

        I. Ulusal Maya Moleküler Biyolojisi ve Biyoteknoloji Sempozyumu

        Attendee

        Bursa-Turkey

        01 September 2007 - 01 September 2007

        01 September 2007 - 01 September 2007

        13th European Congress on Biotechnology

        Attendee

        Barcelona-Spain

        01 September 2006 - 01 September 2006

        01 September 2006 - 01 September 2006

        9th Eurasia Conference on Chemical Sciences (EuAs C2S-9)

        Attendee

        Antalya-Turkey

        01 June 2006 - 01 June 2006

        01 June 2006 - 01 June 2006

        31th FEBS Congress

        Attendee

        İstanbul-Turkey

        01 September 2002 - 01 September 2002

        01 September 2002 - 01 September 2002

        XVI. Ulusal Biyoloji Kongresi

        Attendee

        Malatya-Turkey

        01 May 2002 - 01 May 2002

        01 May 2002 - 01 May 2002

        2rd International Meeting on Free adicals in Health and Disease, The Role of Oxidants and Antioxidants in the Regulation of Chronic Diseases

        Attendee

        İstanbul-Turkey

        Citations

        Total Citations (WOS): 484

        h-index (WOS): 12